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Laboratory of Genetics and Breeding of microorganisms №6

Laboratory of Genetics and Breeding of microorganisms №6

Head of the laboratory : Marina L. Rumyantseva

Phone: +7 (812) 476 28 02

The Laboratory of Genetics and Selection of Microorganisms is at the origin of molecular genetic studies of plant-microbial symbiosis formation. The founder of the laboratory is Professor B.V. Simarov, under whose leadership more than two dozen new genes of S. meliloti responsible for nitrogen-fixing activity, symbiotic efficiency and competitiveness of rhizobia were identified and studied. Under his supervision 18 PhD theses were defended.

Currently, original studies of the genetic bases of biodiversity of nodule bacteria (rhizobia) in geographically different ecosystems are being carried out in the laboratory of Genetics and Selection of Microorganisms under the leadership of M.L. Roumiantseva. There is an intensive research on the genomics of nodule bacteria of alfalfa, sweet clover, fenugreek and goatgrass and on the study of genes determining symbiotic activity and stress tolerance of bacteria (different types of osmotic stress). A work collection of native strains of rhizobia - symbionts of legume plants grown in diversity sites belonging to different origions of cultivated plants, located in the Caucasus, Turkmenistan, Uzbekistan, Kazakhstan (Aral Sea region) and China, has been created in the laboratory.

In recent years, the laboratory has been successfully developing research on rhizobia-specific bacteriophages. The molecular and genetic mechanisms underlying the interaction of phages with microbes are being evaluated, the diversity of elements of bacterial antiphage defence systems is being studied, and the mechanisms of their rapid diversification are being analyzed.

The team of co-authors owns the monograph "Biological diversity of nodule bacteria in ecosystems and agrocenoses. Theoretical bases and methods", which outlines the accumulated theoretical and practical knowledge in the study of native populations of nodule bacteria. An original method for assessing the symbiotic activity of rhizobia in model conditions of microvegetation experiments was developed in the laboratory.

The accumulated knowledge is being used to obtain highly effective stress-tolerant strains and to create highly productive stress-tolerant plant-microbial systems promising for practice. The team has the patents for the symbiotically highly effective strains used to produce the bioproducts (Patents for inventions RU 2734944 C2, 26.10.2020 and RU 2593714 C1, 10.08.2016), and the patent for the created highly productive plant-microbial system (Patent for invention RU 2699526 C2, 05.09.2019).

The research conducted in the laboratory was numerous times supported by RFBR grants (1992-2020), by international grants (INTAS, INCO-COPERNICUS, BACDIVERCITY, CRDF(RFBR- AFGIR) in the period 1997-2012). In recent years, the team participated in the projects supported by RSF (20-16-00105, 17-16-01095), participated in FSTP project No. 14.607.21.0178 dated 26.09.2017. ‘Creation of microbiological preparations to expand the adaptive potential of agricultural crops for nutrition, resistance to stresses and phytopathogens’ (2017-2020), in project WCRC ‘Agrotechnologies of the Future’ (agreement with the Ministry of Education and Science of the Russian Federation; 2020-2024). Currently, the team is a participant of the RSF project 24-26-00274 and is carrying out research under the project FGEW-2024-0007 ‘Study the role of associative rhizobacteria in the modulation of the phytohormone salicylic acid in barley and pea plants and assess the structural diversity and functional significance of genetic elements of fast- and slow-growing nodule bacteria involved in the formation of highly productive stress-resistant symbiotic systems with economically valuable legume grass species’ (2024-2026).

The laboratory team conducts collaborative research with specialists from FRC N.I.Vavilov All-Russian Institute of Plant Genetic Resources (VIR), FGBU A.A. Smorodintsev, V.R. Williams Federal Research Centre of Fodder Production and Agroecology (V.R. VIC), the Faculty of Agrotechnology, Soil Science and Ecology of the St. Petersburg State Agro-Academic University (SPbSAU), Petrozavodsk State University (PetrSU), St. Petersburg Peter the Great Polytechnic University (SPbPU), St. Petersburg State Technological Institute (Technical University; SPbGTI(TU), with the Department of Microbiology and the Department of Genetics and Biotechnology of the Faculty of Biology of the St. Petersburg State University (SPbU), and with the Department of Genetics of the University of Florence, Italy.

Staff

Smirnova Tatyana Anatolyevna – research engineer

GRANTS/CONTRACTS

  • Russian Science Foundation 24-26-00274 "Rhizobiophages of agrocenoses: virulence specificity, taxonomic and genomic diversity "( 2024-2025; head-B. V. Simarov, Doctor of Biological Sciences)
  • Russian Science Foundation 20-16-00105 " Immunity systems of nitrogen-fixing nodule bacteria: assessment of their diversity and prospects for application in agrobiotechnology"(2020-2022; Head-B. V. Simarov, Doctor of Biological Sciences)
  • Russian Science Foundation 17-16-01095 " Analysis of regularities of genomic rearrangements in virulent and non-virulent nodule bacteria and risk assessment of their impact on economically valuable properties and stress resistance of plant and microbial systems "(2017-2019; Head-M. L. Rumyantseva, PhD)
  • NCMU " Agrotechnologies of the Future "(Agreements with the Ministry of Science and Higher Education of the Russian Federation No. 075-15-2020-920 dated 16.11.2020 and No. 075-15-2022-320 dated 20.04.2022)
  • State Contract of the Ministry of Education and Science of the Russian Federation (Agreement No. 14.607.21.0178, RFMEFI60717X0178)
  • RFBR (18 projects for the period from 1993 to 2020)
  • RFBR-AFGIR 09-04-92513-IK_a / CRDF CGP RUB1-2942-ST-09 (Russia-USA bilateral grant)
  • State Contract No. 16. M04. 11. 0013 on the EurAsEC Interstate target program "Innovative Biotechnologies" for 2011-2015
  • Cooperation grant from the Ministry of Science of Finland No. 1132544
  • International projects: INCO-COPERNICUS (INTAS, ICA2-CT-2000-10001);BACDIVERS(QLK3–CT-2002-02097)

List of publications for the period 2019-2024

  1. Vladimirova, M.E.; Roumiantseva, M.L.; Saksaganskaia, A.S.; Muntyan, V.S.; Gaponov, S.P.; Mengoni, A. Hot Spots of Site-Specific Integration into the Sinorhizobium meliloti Chromosome. Int. J. Mol. Sci. 2024, 25, 10421. https://doi.org/10.3390/ijms251910421
  2. Kozlova, A.P.; Muntyan, V.S.; Vladimirova, M.E.; Saksaganskaia, A.S.; Kabilov, M.R.; Gorbunova, M.K.; Gorshkov, A.N.; Grudinin, M.P.; Simarov, B.V.; Roumiantseva, M.L. Soil Giant Phage: Genome and Biological Characteristics of Sinorhizobium Jumbo Phage. Int. J. Mol. Sci. 2024, 25, 7388. https://doi.org/10.3390/ijms25137388
  3. Pishchik, V.N.; Chizhevskaya, E.P.; Kichko, A.A.; Aksenova, T.S.; Andronov, E.E.; Chebotar, V.K.; Filippova, P.S.; Shelenga, T.V.; Belousova, M.H.; Chikida, N.N. Metabolome and Mycobiome of Aegilops tauschii Subspecies Differing in Susceptibility to Brown Rust and Powdery Mildew Are Diverse. Plants 2024, 13, 2343. https://doi.org/10.3390/plants13172343
  4. Pishchik, V.N.; Chizhevskaya, E.P.; Chebotar, V.K.; Mirskaya, G.V.; Khomyakov, Y.V.; Vertebny, V.E.; Kononchuk, P.Y.; Kudryavtcev, D.V.; Bortsova, O.A.; Lapenko, N.G.; et al. PGPB Isolated from Drought-Tolerant Plants Help Wheat Plants to Overcome Osmotic Stress. Plants 2024, 13, 3381. https://doi.org/10.3390/plants13233381
  5. Chebotar, V.K.; Gancheva, M.S.; Chizhevskaya, E.P.; Erofeeva, A.V.; Khiutti, A.V.; Lazarev, A.M.; Zhang, X.; Xue, J.; Yang, C.; Tikhonovich, I.A. Endophyte Bacillus vallismortis BL01 to Control Fungal and Bacterial Phytopathogens of Tomato (Solanum lycopersicum L.) Plants. Horticulturae 2024, 10, 1095. https://doi.org/10.3390/horticulturae10101095
  6. Chebotar VK, Gancheva MS, Chizhevskaya EP, Keleinikova OV, Baganova ME, Zaplatkin AN, Husainov KA. Whole-genome sequence of Kosakonia cowanii strain W006, isolated from seeds of Triticum aestivum L. Microbiol Resour Announc. 2024. 13(4):e0118123. https://doi.org/10.1128/mra.01181-23
  7. Chebotar, V.K.; Zaplatkin, A.N.; Chizhevskaya, E.P.; Gancheva, M.S.; Voshol, G.P.; Malfanova, N.V.; Baganova, M.E.; Khomyakov, Y.V.; Pishchik, V.N. Phytohormone Production by the Endophyte Bacillus safensis TS3 Increases Plant Yield and Alleviates Salt Stress. Plants 2024, 13, 75. https://doi.org/10.3390/plants13010075
  8. Chebotar VK, Gancheva MS, Keleinikova OV, Baganova ME, Zaplatkin AN, Pishchik VN, Chizhevskaya EP. Whole-genome sequence of Bacillus paralicheniformis strain R243 isolated from rice (Oryza sativa L.) roots. Microbiol Resour Announc. 2024. 13(11):e0087924. https://doi.org/10.1128/mra.00879-24
  9. Chebotar VK, Myskova AV, Khudyaeva M, Keleinikova OV, Baganova ME, Zaplatkin AN, Pishchik VN, Chizhevskaya EP. Draft genome sequence of endophyte Bacillus amyloliquefaciens strain Apn01R, isolated from the roots of Alhagi pseudalhagi (Bieb.) Fisch. Microbiol Resour Announc. 2024. e0107424. https://doi.org/10.1128/mra.01074-24
  10. Chebotar VK, Myskova AV, Khudyaeva M, Keleinikova OV, Baganova ME, Zaplatkin AN, Pishchik VN, Chizhevskaya EP. Draft genome sequence and analysis of endophyte Bacillus amyloliquefaciens strain Can02R isolated from the roots of Chenopodium album L. Microbiol Resour Announc. 2024. e0107524. https://doi.org/10.1128/mra.01075-24
  11. Kozlova, A.P.; Saksaganskaia, A.S.; Afonin, A.M.; Muntyan, V.S.; Vladimirova, M.E.; Dzyubenko, E.A.; Roumiantseva, M.L. A Temperate Sinorhizobium Phage, AP-16-3, Closely Related to Phage 16-3: Mosaic Genome and Prophage Analysis. Viruses 2023, 15, 1701. https://doi.org/10.3390/v15081701
  12. Vladimirova M.E., Pernak E.V., Muntyan V.S., Saksaganskaia A.S., Kozlova A.P., Afonin A.M., Yurkov A.P., Zhukov V.A., Roumiantseva M.L. Chloroplast Genome of Medicago lupulina L. var. vulgaris Koch: Structure, Sequences Introduced as a Result of HGT and Viral Nature // Russian Journal of Plant Physiology. 2023. V. 70. Iss. 8. Article 193. https://doi.org/10.1134/S1021443723602331
  13. Muntyan V.S., Vladimirova M.E., Afonin A.M., Muntyan A.N., Roumiantseva M.L. Analysis of salt-sensitive and salt-tolerant Sinorhizobium meliloti strains using DNA microarray, phenotype microarray and genome mining techniques // Proceedings of 23rd International Multidisciplinary Scientific GeoConference SGEM 2023. 2023. V. 23. Iss. 6.1. P. 129-136. https://doi.org/10.5593/sgem2023/6.1/s25.15
  14. Pernak E.V., Vladimirova M.E., Muntyan V.S., Afonin A.M., Roumiantseva M.L. Analysis of CRISPR cassette elements in native isolates of Sinorhizobium meliloti isolated in the Central Asian origin of plant diversity // Proceedings of 23rd International Multidisciplinary Scientific GeoConference SGEM 2023. 2023. V. 23. Iss. 6.1. P. 113-120. https://doi.org/10.5593/sgem2023/6.1/s25.13
  15. Kamova A., Stepanova T., Orlova A., Stepanova G., Rumyantseva M. Methods of increasing the productivity of various varieties and hybrids of variegated alfalfa in the conditions of arable farming biologization BIO Web Conf., 66 (2023) 11001 https://doi.org/10.1051/bioconf/20236611001
  16. Chizhevskaya E.P., Lapenko N.G., Chebotar V.K. Antibacterial and antifungal activity of Chenopodium album L. // Russian Journal of Plant Physiology. 2023. V. 70. Iss. 8. Article 194. https://doi.org/10.1134/S1021443723602525
  17. Chebotar, V.K.; Chizhevskaya, E.P.; Andronov, E.E.; Vorobyov, N.I.; Keleinikova, O.V.; Baganova, M.E.; Konovalov, S.N.; Filippova, P.S.; Pishchik, V.N. Assessment of the Rhizosphere Bacterial Community under Maize Growth Using Various Agricultural Technologies with Biomodified Mineral Fertilizers. Agronomy 2023, 13, 1855. https://doi.org/10.3390/agronomy13071855
  18. Chebotar V.K., Chizhevskaya E.P., Khonina O.V., Kostitsin R.D., Kurmanbayev A.A., Mukhambetov B., Pishchik V.N., Baganova M.E., Lapenko N.G. Biotechnological potential of galophytes and their microbiomes for agriculture in Russia and Kazakhstan // Russian Journal of Plant Physiology, 2023, V. 70. Iss.8. Article 183. https://doi.org/10.1134/S1021443723602513
  19. Chebotar, V. K., Gancheva, M. S., Chizhevskaya, E. P., Keleinikova, O. V., Baganova, M. E., Zaplatkin, A. N., & Husainov, K. A. (2023). Whole-genome sequence of Paenibacillus amylolyticus strain W018, isolated from Triticum aestivum L. seeds, obtained using nanopore sequencing. Microbiology resource announcements, 12(10), e0068723. https://doi.org/10.1128/MRA.00687-23
  20. Chebotar, V.K.; Gancheva, M.S.; Chizhevskaya, E.P.; Baganova, M.E.; Keleinikova, O.V.; Husainov, K.A.; Pishchik, V.N. Genome Sequence of the Plant-Growth-Promoting Endophyte Curtobacterium flaccumfaciens Strain W004. Data 2023, 8, 187. https://doi.org/10.3390/data8120187
  21. Чеботарь В.К., Заплаткин А.Н., Балакина С.В., Гаджиев Н.М., Лебедева В.А., Хютти А.В., Чижевская Е.П., Филиппова П.С., Келейникова О.В., Баганова М.Е., Пищик В.Н. Урожайность и поражаемость картофеля ризоктониозом и фитофторозом под влиянием эндофитных бактерий Bacillus thuringiensis W65 и Bacillus amyloliquefaciens P20 // Сельскохозяйственная биология. 2023. Т. 58. № 3. С. 429-446. https://doi.org/10.15389/agrobiology.2023.3.429rus
  22. Zverev, A. O., Kurchak, O. N., Orlova, O. V., Onishchuk, O. P., Kichko, A. A., Eregin, A. V., Naliukhin, A. N., Pinaev, A. G., & Andronov, E. E. (2023). Dynamic of the Soil Microbiota in Short-Term Crop Rotation. Life (Basel, Switzerland), 13(2), 400. https://doi.org/10.3390/life13020400
  23. Онищук О.П., Курчак О.Н., Кимеклис А.К., Аксенова Т.С., Андронов Е.Е., Проворов Н.А. Биоразнообразие симбиозов, образуемых клубеньковыми бактериями Rhizobium leguminosarum c бобовыми растениями галегоидного комплекса // Сельскохозяйственная биология. 2023. Т. 58. № 1. С. 87-99. https://doi.org/10.15389/agrobiology.2023.1.87rus
  24. Roumiantseva M.L., Vladimirova M.E., Saksaganskaia A.S., Muntyan V.S., Kozlova A.P., Afonin A.M., Baturina O.A., Simarov B.V. Ensifer meliloti L6-AK89, an Effective Inoculant of Medicago lupulina Varieties: Phenotypic and Deep-Genome Screening // Agronomy. 2022. V. 12. Iss. 4. 766. https://doi.org/10.3390/agronomy12040766
  25. Muntyan V.S., Roumiantseva M.L. Molecular Phylogenetic Analysis of Salt-Tolerance-Related Genes in Root-Nodule Bacteria Species Sinorhizobium meliloti // Agronomy. 2022. V. 12. Iss. 8. 1968. https://doi.org/10.3390/agronomy12081968
  26. Vladimirova M.E., Muntyan V.S., Afonin A.M., Muntyan A.N., Baturina O.A., Dzuybenko E.A., Saksaganskaya A.S., Simarov B.V., Roumiantseva M.L., Kabilov M.R. Complete Genome of Sinorhizobium meliloti AK76, a Symbiont of Wild Diploid Medicago lupulina from the Mugodgary Mountain Region // Microbiology Resource Announcements. 2022. V. 11. Iss. 3. e0108821. https://doi.org/10.1128/mra.01088-21
  27. Saksaganskaia A.S., Muntyan V.S., Muntyan A.N., Simarov B.V., Roumiantseva M.L. Abundance of phage-related sequences on non-symbiotic plasmids of Sinorhizobium meliloti from centers of legume plants diversity // 22nd International Multidisciplinary Scientific GeoConference SGEM 2022. 2022. V. 22. Iss. 6.1. P. 49-56. https://doi.org/10.5593/sgem2022/6.1/s25.06
  28. Muntyan V.S., Saksaganskaia A.S., Muntyan A.N., Vladimirova M.E., Roumiantseva M.L. Stress and immunity of nodule bacteria Sinorhizobium meliloti: localization, polymorphism and phylogeny of genetic determinants // 22nd International Multidisciplinary Scientific GeoConference SGEM 2022. 2022. V. 22. Iss. 6.1. P. 121-128. https://doi.org/10.5593/sgem2022/6.1/s25.15
  29. Козлова А.П., Джегер Г.С., Болотникова О.И., Румянцева М.Л. Изучение взаимоотношений между ризобиофагами и бактериями Sinorhizobium meliloti в целях совершенствования биопрепаратов // «Биотехнологии и безопасность в техносфере»: сборник материалов II Национальной научной конференции студентов и молодых ученых, 2–3 марта 2022 г. В 2 ч. Ч. 1. С 18-20.
  30. Chebotar V.K., Chizhevskaya E.P., Vorobyov N.I., Bobkova V.V., Pomyaksheva L.V., Khomyakov Y.V., Konovalov S.N. The Quality and Productivity of Strawberry (Fragaria × ananassa Duch.) Improved by the Inoculation of PGPR Bacillus velezensis BS89 in Field Experiments // Agronomy. 2022. V. 12. Iss. 11. 2600. https://doi.org/10.3390/agronomy12112600
  31. Chebotar V.K., Chizhevskaya E.P., Baganova M.E., Keleinikova O.V., Yuzikhin O.S., Zaplatkin A.N., Khonina O.V., Kostitsin R.D., Lapenko N.G. Endophytes from Halotolerant Plants Aimed to Overcome Salinity and Draught // Plants. 2022. V. 11. Iss. 21. 2992. https://doi.org/10.3390/plants11212992
  32. Chebotar V.K., Gancheva M.S., Chizhevskaya E.P., Keleinikova O.V., Baganova M.E., Zaplatkin A.N., Pishchik V.N. Draft Genome Sequence of Bacillus vallismortis Strain BL01, Isolated from Artemisia lerchiana Web. Roots // Microbiology Resource Announcements. 2022. V. 11. Iss. 11. e0064722. https://doi.org/10.1128/mra.00647-22
  33. Mirskaya G.V., Khomyakov Y.V., Rushina N.A., Vertebny V.E., Chizhevskaya E.P., Chebotar V.K., Chesnokov Y.V., Pishchik V.N. Plant Development of Early-Maturing Spring Wheat (Triticum aestivum L.) under Inoculation with Bacillus sp. V2026 // Plants (Basel). 2022. V. 11. Iss. 14. 1817. https://doi.org/10.3390/plants11141817
  34. Chebotar V.K., Gancheva M.S., Voshol G.P., Malfanova N.V., Karasev E.S., Chizhevskaya E.P., Zaplatkin A.N., Khiutti A.V., Lazarev A.M., Gadjiev N.M., Lebedeva V.A., Balakina S.V. Draft Genome Sequence of the Tomato Stem Endophyte Bacillus safensis TS3 // Microbiology Resource Announcements. 2022. V. 11. Iss. 11. e0081622. https://doi.org/10.1128/mra.00816-22
  35. Sviridova O.V., Vorobyov N.I., Andronov E.E., Kurchak O.N., Chizhevskaya E.P., Pukhalskiy Ya.V., Pishchik V.N., Loskutov S.I., Sitnov V.Yu. Optimum ratio of complex biological product and fertilize (NPK) and the contribution of fungi and bacteria to the general decomposition and mulching of coniferous wood waste // Agronomy Research. 2022. V. 20. No. 4. P. 827–841. https://doi.org/10.15159/ar.22.059
  36. Muntyan V.S., Afonin A.M., Vladimirova M.E., Saksaganskaya A.S., Gribchenko E.S., Baturina O., Roumiantseva M.L. Complete genome sequence of Sinorhizobium meliloti S35m, a salt-tolerant isolate from alfalfa rhizosphere in soil native to the Caucasus region // Microbiology Resource Announcements. 2021. V. 10. Iss. 11. e01417-20. https://doi.org/10.1128/MRA.01417-20
  37. Saksaganskaia A.S., Muntyan V.S., Muntyan A.N., Simarov B.V., Roumiantseva M.L. Allelic polymorphism of symbiotically essential genes of Sinorhizobium meliloti native to legume plants origin at the Caucasus // 21th International Multidisciplinary Scientific GeoConference SGEM 2021. 2021. V. 21. Iss. 6.1. P. 55-62. https://doi.org/10.5593/sgem2021/6.1/s25.08
  38. Saksaganskaia A.S., Vladimirova M.E., Muntyan V.S., Roumiantseva M.L. Sinorhizobium meliloti harboured distinct alleles of nod genes showed different symbiotic activity on Medicago lupulina and Medicago varia // 21th International Multidisciplinary Scientific GeoConference SGEM 2021. 2021. V. 21. Iss. 6.1. P. 257-262. https://doi.org/10.5593/sgem2021/6.1/s25.33
  39. Onishchuk O., Kurchak O., Chizhevskaya E., Simarov B., Provorov N. Supply of acetyl-CoA to N2-fixing bacteroids: Insights from the mutational and proteomic analyses of Sinorhizobium meliloti // Biological Communications. 2021. V. 66. Iss. 2. P. 124-128. https://doi.org/10.21638/spbu03.2021.203
  40. Pishchik V., Mirskaya G., Chizhevskaya E., Chebotar V., Chakrabarty D. Nickel stress-tolerance in plant-bacterial associations // PeerJ. 2021. V.9. e12230. https://doi.org/10.7717/peerj.12230
  41. Chebotar V.K., Voshol G.P., Malfanova N.V., Chizhevskaya E.P., Zaplatkin A.N., Komarova O.V., Baganova M.E., Lazarev A.M., Balakina S.V. Draft genome sequence of plant growth-promoting Bacillus velezensis BS89 // Microbiol Resour Announc. 2021. V. 10. Iss. 1. e01294-20. https://doi.org/10.1128/MRA.01294-20
  42. Chebotar V.K., Zaplatkin A.N., Komarova O.V., Baganova M.E., Chizhevskaya E.P., Polukhin N.I., Balakina S.V. Endophytic bacteria for development of microbiological preparations for increasing productivity and protection of new potato varieties // Research on Crops. 2021. V. 22. Special Issue. P. 104-107. https://doi.org/10.31830/2348-7542.2021.025
  43. Zavalin A., Chebotar V., Alferov, A., Chernova, L., Shcherbakova, E., & Chizhevskaya, E. Nitrogen use by plants and nitrogen flows after application of standard and biomodified nitrogen fertilizers on barley // Biological Communications. 2021. V. 66. Iss. 4. P. 283–289. https://doi.org/10.21638/spbu03.2021.401
  44. Vladimirova M.E., Muntyan V.S., Kozlova A.P., Grudinin M.P., Roumiantseva M.L. CRISPR/Cas in genomes of Sinorhizobium meliloti // 20th International Multidisciplinary Scientific GeoConference SGEM 2020. 2020. V. 20. Iss. 6.1. P. 215-222. https://doi.org/10.5593/sgem2020/6.1/s25.028
  45. Kozlova A.P., Muntyan V.S., Vladimirova M.E., Grudinin M.P., Roumiantseva M.L. Comparative genomics of the sinorhizobial PhiLM21-like intact prophages on complete chromosomes // 20th International Multidisciplinary Scientific GeoConference SGEM 2020. 2020. V. 20. Iss. 6.1. P. 207-214. https://doi.org/10.5593/sgem2020/6.1/s25.027
  46. Saksaganskaia A.S., Vladimirova M.E., Afonin A.M., Simarov B.V., Roumiantseva M.L. Cryptic plasmids essential for Sinorhizobium meliloti fitness // 20th International Multidisciplinary Scientific GeoConference SGEM 2020. 2020. V. 20. Iss. 6.1. P. 223-230. https://doi.org/10.5593/sgem2020/6.1/s25.029
  47. Muntyan V.S., Antonova E.V., Muntyan A.N., Simarov B.V., Roumiantseva M.L. Phylogenetic analysis of vertically and horizontally acquired genes responsible for salt tolerance of nitrogen-fixing alpha-proteobacteria // 20th International Multidisciplinary Scientific GeoConference SGEM 2020. 2020. V. 20. Iss. 6.1. P. 287-294. https://doi.org/10.5593/sgem2020/6.1/s25.038
  48. Vladimirova M.E., Afonin A.M., Muntyan V.S., Simarov B.V., Roumiantseva M.L. "Evaluation of Sinorhizobium meliloti Genomic Islands Inserted into the tRNA-Thr," 2020 Cognitive Sciences, Genomics and Bioinformatics (CSGB), Novosibirsk, Russia, 2020, pp. 118-121, https://doi.org/10.1109/CSGB51356.2020.9214720
  49. Muntyan V.S., Kozlova A.P., Afonin A.M., Muntyan A.N., Dzyubenko E.A., Kabilov M.R., Antonova E.V., Roumiantseva M.L. "Comparative Genomic Analysis of Moderate Bacteriophages of Alfalfa Root Nodule Bacteria," 2020 Cognitive Sciences, Genomics and Bioinformatics (CSGB), Novosibirsk, Russia, 2020, pp. 72-75, https://doi.org/10.1109/CSGB51356.2020.9214723
  50. Tsyganov V.E., Tsyganova A.V., Gorshkov A.P., Seliverstova E.V., Kim V.E., Chizhevskaya E.P., Belimov A.A., Serova T.A., Ivanova K.A., Kulaeva O.A., Kusakin P.G., Kitaeva A.B., and Tikhonovich I.A. Efficacy of a Plant-Microbe System: Pisum sativum (L.) Cadmium-Tolerant Mutant and Rhizobium leguminosarum Strains, Expressing Pea Metallothionein Genes PsMT1 and PsMT2, for Cadmium Phytoremediation // Frontiers in Microbiology. 2020. V. 11. Article 15. https://doi.org/10.3389/fmicb.2020.00015
  51. Аксенова Т.С., Чирак Е.Р., Онищук О.П., Курчак О.Н., Афонин А.М., Пинаев А.Г., Андронов Е.Е., Проворов Н.А. Выявление анцестральных характеристик генома у Rhizobium leguminosarum bv. trifolii. Сельскохозяйственная биология. 2020. Т. 55. № 3. С. 489-498. https://doi.org/10.15389/agrobiology.2020.3.489rus [Aksenova T.S., Chirak E.R., Onishchuk O.P., Kurchak O.N., Afonin A.M., Pinaev A.G., Andronov E.E., Provorov N.A. Identification of the ancestral characteristics in the genome of Rhizobium leguminosarum bv. trifolii. Sel’skokhozyaistvennaya biologiya [Agricultural Biology]. 2020. V. 55. № 3, P. 489-498. https://doi.org/10.15389/agrobiology.2020.3.489eng]
  52. Muntyan V.S., Baturina O.A., Afonin A.M., Cherkasova M.E., Laktionov Y.V., Saksaganskaya A.S., Kabilov M.R., Roumiantseva M.L. // Draft genome sequence of Sinorhizobium meliloti AK555 // Microbiol Resour Announc. 2019. V. 8. Iss. 2. e01567-18. https://doi.org/10.1128/MRA.01567-18
  53. Baturina O.A., Muntyan V.S., Afonin A.M., Cherkasova M.E., Simarov B.V., Kabilov M.R., Roumiantseva M.L. // Draft genome sequence of Sinorhizobium meliloti strain CXM1-105 // Microbiol Resour Announc. 2019. V. 8. Iss. 2. e01621-18. https://doi.org/10.1128/MRA.01621-18
  54. Baturina O.A., Muntyan V.S., Cherkasova M.E., Saksaganskaya A.S., Dzuybenko N.I., Kabilov M.R., Roumiantseva M.L. // Draft genome sequence of Sinorhizobium meliloti strain AK170 // Microbiol Resour Announc. 2019. V. 8. Iss. 1. e01571-18. https://doi.org/10.1128/MRA.01571-18
  55. Черкасова М.Е., Мунтян В.С., Саксаганская А.С., Симаров Б.В., Румянцева М.Л. Sinorhizobium meliloti: хромосомные типы и геномные острова // Экологическая генетика. 2019. Т. 17. № 3. С. 23-38. https://doi.org/10.17816/ecogen17323-38 [Cherkasova M.E., Muntyan V.S., Saksaganskaia A.S., Simarov B.V., Roumiantseva M.L. // Sinorhizobium meliloti: chromosomal types and genomic islands // Ecol. gen. 2019. V. 17. Iss. 3. P.23-38. https://doi.org/10.17816/ecogen17323-38]
  56. Muntyan, V. S.; Olekhnovitch, R. O.; Wackerow-Kouzova, N. D.; Prokhorova, V. A.; Kozlova, A. P. Bacteriophages of Sinorhizobium meliloti native to alfalfa origin of diversity at the Caucasus // 19th International Multidisciplinary Scientific GeoConference SGEM 2019. V. 6.1. P. 567-574. https://doi.org/10.5593/sgem2019/6.1/S25.073
  57. Румянцева М.Л. Клубеньковые бактерии: перспективы мониторинга симбиотических свойств и стрессоустойчивости с использованием генетических маркеров (обзор) // Сельскохозяйственная биология. 2019. Т. 54. №5. С. 847-862. https://doi.org/10.15389/agrobiology.2019.5.847rus [Roumiantseva M.L. Root nodule bacteria: perspectives of monitoring symbiotic properties by applying genetic markers (review) // Sel’skokhozyaistvennaya Biologiya [Agricultural Biology], 2019, Vol. 54, № 5, p. 847-862. https://doi.org/10.15389/agrobiology.2019.5.847eng]
  58. Румянцева М.Л., Владимирова М.Е., Мунтян В.С., Степанова Г.В., Саксаганская А.С., Кожемяков А.П., Орлова А.Г., Becker A., Симаров Б.В. Высокоэффективные штаммы клубеньковых бактерий люцерны (Medicago varia L.): молекулярно-генетическая характеристика и использование в сопряженной селекции // Сельскохозяйственная биология. – 2019. Т. 54. № 6. – С. 1306-1323. https://doi.org/10.15389/agrobiology.2019.6.1306rus [Roumiantseva M.L., Vladimirova M.E., Muntyan V.S., Stepanova G.V., Saksaganskaya A.S., Kozhemyakov A.P., Orlova A.G., Becker A., Simarov B.V. Highly effective root nodule inoculants of alfalfa (Medicago varia L.): molecular-genetic analysis and practical usage in cultivar creation // Sel'skokhozyaistvennaya Biologiya [Agricultural Biology], 2019, Vol. 54, № 6, p. 1306-1323. https://doi.org/10.15389/agrobiology.2019.6.1306eng]
  59. Карасев Е.С., Андронов Е.Е., Аксенова Т.С., Чижевская Е.П., Тупикин А.Е., Проворов Н.А. Эволюции ризобий козлятника (Neorhizobium galegae): анализ полиморфизма генов фиксации азота и развития клубеньков // Генетика. 2019. Т. 55. № 2. С. 234-238. https://doi.org/10.1134/S0016675819020085 [Karasev E.S., Andronov E.E., Aksenova T.S., Chizhevskaya E.P., Provorov N.A., Tupikin A.E. Evolution of goat’s rue rhizobia (Neorhizobium galegae): analysis of polymorphism of the nitrogen fixation and nodule formation genes // Russian Journal of Genetics. 2019. V. 55. № 2. P. 263-266. https://doi.org/10.1134/S1022795419020078].

 

CHAPTERS IN MONOGRAPHS

  1. Roumiantseva, M. L., Vladimirova, M. E., Saksaganskaia, A. S., Muntyan, V. S., Kozlova, A. P., Afonin, A. M., Baturina, O. A., & Simarov, B. V. (2024). Detailed Genome Screening of a Highly Efficient Diploid Alfalfa Symbiont Ensifer meliloti L6-AK89. Research Advances and Challenges in Agricultural Sciences Vol. 6, 49–104. https://doi.org/10.9734/bpi/racas/v6/3170G
  2. Muntyan, V. S., & Roumiantseva, M. L. (2024). Phylogenetic Analysis of Genes Responsible for the Primary and Secondary Response of Sinorhizobium meliloti Towards Salinity Stress. Research Advances and Challenges in Agricultural Sciences Vol. 6, 18–48. https://doi.org/10.9734/bpi/racas/v6/3162G

 

PARTICIPATION IN SCIENTIFIC EVENTS IN 2019-2024

 

IV Congress of Young Scientists, November 27-29, 2024, Sirius Federal Territory:

  • Kozlova A. P., Rumyantseva M. L. Oral communication on the developed topic in the framework of the NCMU project "Agricultural Technologies of the future"

International Conference "Bacteriophages: from Basic research to Application", September 21-23, 2024, Novosibirsk:

  • Kozlova A. P., Gorbunova M. K., Saksaganskaya A. S., Simarov B. V., Rumyantseva M. L. Soil bacteriophages of nodule bacteria Sinorhizobium meliloti

 IV International Scientific Conference "Plants and Microorganisms: Biotechnology of the future" PLAMIC2024, September 15-22, 2024, Baikalsk:

  • Chizhevskaya E. P., Chebotar V. K., Khudyaeva M. V., Kichko A. A., Lapenko N. G., Kostitsyn R. D., Khonina O. V., Tikhonovich I. A.Specificity of endophytic microbiomes of drought-resistant plants in the semi-desert steppe of the Stavropol Territory
  • Khudyaeva M. V., Chebotar V. K., Baganova M. E., Keleynikova O. V., Erofeeva A.V., Yuzikhin O. S., Chizhevskaya E. P., Kostitsyn R. D., Khonina O. V., Lapenko N. G., Tikhonovich I. A. Agricultural potential of endophytic bacteria of drought-resistant plants
  • Chebotar V. K., Khudyaeva M. V., Pishchik V. N., Chizhevskaya E. P., Baganova M. E., Keleynikova O. V., Fesenko I. A., Mamaeva A. S., Tikhonovich I. A. Microbiomes of drought-resistant plants for creating multifunctional complex microbiological preparations for crop production

 III International Conference"Conservation and enhancement of genetic resources of microorganisms", dedicated to the 300th anniversary of St. Petersburg State University, July 08-10, 2024, St. Petersburg:

  • Baganova M. E., Chebotar V. K., Patatkin A. N., Gancheva M. S., Pishchik V. N., Keleynikova O. V., Chizhevskaya E. P. Biologically active mineral fertilizers containing useful strains of endophytic bacteria to increase the coefficient of their use
  • Khudyaeva M. V., Chebotar V. K., Baganova M. E., Keleynikova O. V., Erofeeva A.V., Yuzikhin O. S., Chizhevskaya E. P., Tikhonovich I. A. Endophytic bacteria of drought-resistant plants for the control of biotic and abiotic stresses
  • Keleynikova O. V., Chebotar V. K., Baganova M. E., Patatkin A. N., Pishchik V. N., Chizhevskaya E. P. Microbiological preparation based on the endophyte Bacillus amyloliquifaciens V417 for the protection of agricultural crops from diseases

 VIII Congress of the Vavilov Society of Geneticists and Breeders, dedicated to the 300th anniversary of Russian Science and Higher Education, June 14-19, 2024, Saratov:

  • Rumyantseva M. L., Vladimirova M. E., Muntyan V. S. Molecular-genetic, ecological and evolutionary aspects of the formation of the accessory part of the nodule bacteria pangenome
  • Aprelkova A. P., Muntyan V. S., Vladimirova M. E., Muntyan A. N., Rumyantseva M. L. Antiphage protection systems of nodule bacteria Sinorhizobium spp.
  • Gorbunova M. K., Kozlova A. P., Saksaganskaya A. S., Muntyan V. S., Simarov B. V., Rumyantseva M. L. Diversity and biological properties of rhizobiophages
  • Andronov E. E., Igolkina A. A., Zverev A. O., Chizhevskaya E. P., Provorov N. A. Coordination of diversity in plant-microbial systems
  • Khudyaeva M. V., Chebotar V. K., Chizhevskaya E. P., Keleynikova O. V., Baganova M. E., Erofeeva A.V., Kostitsyn R. D., Khonina O. V., Lapenko N. G., Tikhonovich I. A. Endophytic bacteria of drought-resistant plants-antagonists of phytopathogenic fungi and bacteria

 48th FEBS Congress, 29 June – 3 July 2024, Milano, Italy:

  • Roumiantseva M., Saksaganskaia A., Kozlova A., Vladimirova M., Gorbunova M., Aprelkova A., Muntyan A., Muntyan V., Simarov B. Phage-related sequences and antiphage defense systems in Sinorhizobium meliloti

All-Russian Scientific and Practical Conference with international participation "Biotech-2024", April 16-19, 2024, St. Petersburg:

  • Gorbunova M. K., Kozlova A. P., Rumyantseva M. L. Biological properties of rhizobiophage from soils of the North-Western region of the Russian Federation
  • Aprelkova A. P., Muntyan V. S., Rumyantseva M. L. Antiphage protection systems of nodule bacteria Sinorhizobium spp.

V All-Russian Congress on Plant Protection, April 16-19, 2024, St. Petersburg:

  • Pischik V. N., Temnova O. V., Chizhevskaya E. P., Erofeeva A.V., Kudryavtsev D. V., Bortsova O. A., Tyr'shkin L. G., Chikida N. N., Chebotar V. K. Epiphytic bacteria of aegilops grains - potential for biological protection of grain crops from root rot and leaf diseases

IV All-Russian Scientific and Practical Conference with international participation "DEVELOPMENT of PHYSICAL AND CHEMICAL BIOLOGY, BIOTECHNOLOGY AND BIOINFORMATICS AT THE PRESENT STAGE", October 25-27, 2023, Irkutsk:

  • Gorbunova M. K., Kozlova A. P., Rumyantseva M. L.Трансдуктанты джамбоTransductants of the S. meliloti jumbophage. meliloti

III All-Russian Scientific and Practical Conference for students, postgraduates and young scientists "Polytech to Life Sciences", October 24-27, 2023, St. Petersburg:

  • Gorbunova M. K., Kozlova A. P., Rumyantseva M. L. Rhizobiophages of nodule bacteria Sinorhizobium meliloti in the North-Western region of the Russian Federation
  • Aprelkova A. P., Muntyan V. S., Rumyantseva M. L. Spectrum of species-specific antiviral systems in genomes of highly effective strains of Sinorhizobium meliloti

All-Russian Scientific School-conference of young scientists and students "Genetic technologies in research of natural compounds", October 3-7, 2023, Vladivostok:

  • Chebotar V. K., Chizhevskaya E. P., Gancheva M. S. Search for agronomically valuable strains of endophytic bacteria based on the analysis of their genomes

4th Russian Microbiological Congress, September 24-29, 2023, Tomsk:

  • Kozlova A. P., Muntyan V. S., Rumyantseva M. L. Biological and genomic characteristics of the jumbo phage Sinorhizobium meliloti

X Congress of the Society of Plant Physiologists of Russia (OFR) "Plant Biology in the era of global climate change", September 18-23, 2023, Ufa:

  • Saksaganskaya A. S., Muntyan V. S., Rumyantseva M. L. Analysis of the region of symbiotic genes on pSymA Sinorhizobium meliloti-symbionts of economically valuable legumes

II All-Russian School-conference "Conservation and multiplication of genetic resources of microorganisms", June 26-27, 2023, St. Petersburg:

  • Vladimirova M. E., Muntyan V. S., Rumyantseva M. L. Analysis of site-specific integration of phage DNA, using the example of Sinorhizobium melilotistrains from итрагрессивнойthe alfalfa itragressive hybridization center
  • Muntyan V. S., Rumyantseva M. L. Genetic analysis Sinorhizobium of Sinorhizobium meliloti strains withcontrasting differences in salt toleranceсолеустойчивости
  • Pernak E. V., Kozlova A. P., Saksaganskaya A. S., Vladimirova M. E., Muntyan V. S., Rumyantseva M. L. Analysis of CRISPR-Cas systems in natural isolates of Sinorhizobium melilotiisolated in the Central Asian gene center of cultivated plants
  • Chebotar V. K., Chizhevskaya E. P., Keleynikova O. V., Baganova M. E., Patatkin A. N., Kostitsyn R. D., Khonina O. V., Lapenko N. G. Эндофиты Halophyte endophytes as candidates for the development of anti-stress microbiological preparations

 All-Russian Conference "Plant Genetic Resources for Genetic Technologies", June 26-27, 2023, St. Petersburg:

  • Chikida N. N., Shelenga T. V., Belousova M. Kh., Filippova P. S., Chizhevskaya E. P., Chebotar V. K., Pishchik V. N. Use of the metabolomic profile of Aegilops tauschii Coss species resistant and unstable to leaf diseasesAegilops tauschii Coss. as a model for understanding pathogenesis inhibition mechanisms in D-genome genotypes

 XI International Scientific and Practical Conference "Plant Protection from Harmful organisms", June 19-23, 2023, Krasnodar:

  • Chebotar V. K., Chizhevskaya E. P., Keleynikova O. V., Baganova M. E., Patatkin A. N., Erofeeva A.V., Kostitsyn R. D., Khonina O. V., Lapenko N. G. Endophytic bacteria of halophytic plants as a promising resource for creating multifunctional microbiological preparations for crop production on arid and saline soils

III International Conference " Plants and Microorganisms: Biotechnology of the Future "(PLASTIC2022), October 3-8, 2022, St. Petersburg:

  • Vladimirova M.E., Roumiantseva M.L. Site specific integration of phage-related sequences in Sinorhizobium meliloti chromosome
  • КозловаKozlovaА.A..P.Мунтян,.Muntyan., V.S..Е,, VladimirovaМM.ЛE. Анализ,почвенныхRumyantseva бактериофагов M. L. [Kozlova A.P.AnalysisMuntyan V.S., Vladimirova M.E., Rumyantseva M.L.of soil bacteriophages Sinorhizobium melilotiSinorhizobium meliloti]
  • MuntyanV..S.., MuntyanA..НN., RumyantsevaM..L.. Molecular-phylogenetic analysis of genes of the primary response of nodule bacteria of the species Sinorhizobium meliloti to salt stress [Muntyan V. S., Muntyan A. N., Rumyantseva M. L. Molecular phylogenetic analysis of genes of Sinorhizobium meliloti responsible for primary salt stress adaptation]
  • СаксаганскаяSaksaganskaiaА.A..S.Мунтян,.Muntyan., V.S..Л, Roumiantseva разнообразиеM.иL.филогения генаIntraspecificnodAdiversityandбактерийphylogenyлюцерны из первичного генцентра бобовых растений [Saksaganskaia A.S., Muntyan V.S., Roumiantseva M.L.of the NODA gene of alfalfa nodule bacteria from the legume plants primary gene center
  • Chebotar V..K., Gancheva M..S., ChizhevskayaE..P.., Pishchik V..НN., Patatkin A..НN., Keleynikova O..V., Baganova M..E.. Endophytic bacteria are a promising resource for creating new microbiological preparations for plant protection and nutrition растений[Chebotar V. K., Gancheva M. S., Chizhevskaya E. P., Pischik V. N., Zaplatkin A. N., Keleynikova O. V., Baganova M. E. Endophytic bacteria are a promising resource for the development of new microbiological preparations for the protection and nutrition of plants]

 VI All-Russian School-conference with international participation for young scientists "Molecular-genetic and cellular aspects of plant-microbial interactions", October 5, 2022, St. Petersburg:

  • Козлова А.П.KozlovaМунтянA., P., Румянцева М.Л.,SinorhizobiumMuntyanmeliloti [V.S..P,, VladimirovaM..E.., ,RumyantsevaM..L.Rumyantseva AnalysisL. Analysis of of soil bacteriophages Sinorhizobium meliloti Sinorhizobiummeliloti]

IUMS Congress (IUMS2022, online), 20-22 July 2022: 

  • Kozlova A.P., Muntyan V.S., Vladimirova M.E., Saksaganskaya A.S., Roumiantseva M.L. Phages of root nodule bacteria native to Primary Gene Center of Cultivated Plants at the Caucus

 The Biochemistry Global Summit (25th IUBMB Congress, the 46th FEBS Congress and the 15th PABMB Congress), 9-14 July 2022, Lisbon, Portugal:

  • Kozlova A., Vladimirova M., Muntyan V., Pernak E., Roumiantseva M. Sequences related to Rhizobium phage 16-3 in genomes of geographically distant Sinorhizobium meliloti strains, root nodule symbionts of alfalfa

13th International Multiconference on "Bioinformatics of Genome Regulation and Structure/Systems Biology" – BGRS/SB-2022, 04-08 of July 2022, Novosibirsk, Russia (13thяInternationalMulticonference "Bioinformaticsof GenomeRegulationandStructure/Systems Biology /SystemsBiology" – BGRS / SB-2022, July 4-8 2022 , 2022, г. Novosibirsk, Russia):

  • Kozlova A.P., Muntyan V.S., Vladimirova M.E., Roumiantseva M.L. Search and analysis of prophages related to phage AP-16-3 in genomes of Sinorhizobium spp.

First All-Russian School-conference "Conservation and multiplication of genetic resources of microorganisms", June 22-23, 2022, St. Petersburg:

  • Kozlova A. P., Muntyan V. S., Vladimirova M. E., Rumyantseva M. L. Bacteriophages of nodule bacteria from the Central Asian genocenter of cultivated plants
  • Saksaganskaya A. S., Muntyan V. S., Muntyan A. N., Simarov B. V., Rumyantseva M. L. Occurrence of phage-derived sequences on non-symbiotic plasmids of Sinorhizobium meliloti
  • Gancheva M. S., Chizhevskaya E. P., Pischik V. N., Keleynikova O. V., Baganova M. E., Patatkin A. N., Chebotar V. K. Genome assembly of the endophytic bacterium Bacillusvallismortis strain BL01

III All-Russian Conference "High-throughput Sequencing in Genomics", June 19-24, 2022, Novosibirsk:

  • Kozlova A. P., Muntyan V. S., Rumyantseva M. L. Jumbo phage Sinorhizobium meliloti

V All-Russian School-conference with international participation for young scientists "Molecular-genetic and cellular aspects of plant-microbial interactions", October 6-8, 2021, St. Petersburg:

  • Vladimirova M. E., Rumyantseva M. L. Localization analysis терминацииof the replication termination region in Sinorhizobium meliloti
  • Saksaganskaya A. S., Vladimirova M. E., Muntyan V. S., Rumyantseva M. L. Symbiotrophic indicators of plant-microbial systems based on economically valuable alfalfa species and Sinorhizobium melilotistrains containing different alleles of virulence genes
  • Kozlova A. P., Muntyan V. S., Vladimirova M. E. Search and analysis of sequences similar to Rhizobium phage 16-3 in the genomes of Sinorhizobium meliloti

 The 14th European Nitrogen Fixation Conference (ENFC 2021), 22nd September – 22nd October 2021, Aarhus University, Denmark:

  • Muntyan V., Roumiantseva M. Molecular phylogenetic approach to analyze evolutionary pathways of salt tolerance-related genes in root-nodulated Sinorhizobium meliloti
  • Vladimirova M., Roumiantseva M. Phage related sequences a site specifically integrated into isoacceptor tRNA genes of Sinorhizobium meliloti

45th FEBS Congress (virtual), 3-8 July 2021, Ljubljana, Slovenia:

  • Vladimirova M., Muntyan V., Afonin A., Saksaganskaya A., Antonova E., Simarov B., Roumiantseva M. Prophages and phage related sequences in chromosomes of Sinorhizobium meliloti isolates native to Aral Sea region
  • Saksaganskaia A., Muntyan V., Muntyan A., Afonin A., Simarov B., Roumiantseva M. Are cryptic plasmids of Sinorhizobium meliloti attractive within phage infection?
  • Kozlova A., Muntyan V., Muntyan A., Afonin A., Dzyubenko E., Roumiantseva M. Recombinant form of Sinorhizobium phage AP16 isolated from mountain region of Caucasus
  • Bakaev M., Vladimirova M., Kozlova A., Muntyan V., Afonin A., Grudinin M., Roumiantseva M. Abundant of CRISPR/Cas elements in genomes of nitrogen-fixing bacteria from the genus Sinorhizobium

VII Youth School-Conference on Molecular and Cellular Biology of the Institute of Cytology of the Russian Academy of Sciences, October 12-15, 2020, St. Petersburg:

  • Владимирова М.Е.VladimirovaM. E. В.С., Румянцева М.Л.MuntyanSinorhizobium V. S.meliloti,ThrRoumiantsevaM. L.) [VladimirovaGenomic, islands V.S., Roumiantseva M.L. Genomic islands of Sinorhizobiummeliloti site-specifically integrated into the tRNA-Thr(ggt))]
  • Козлова А.П.KozlovaA. P. В.С., Румянцева М.Л.Muntyanризофага V. S.Kozlova, DzyubenkoE. A.,Afonin A.M., ,Roumiantseva M. L.New recombinant form.M., RoumiantsevaM.L. New recombinant form of rhizophage 16-3 from soil of Caucasus Caucasus]
  • Saksaganskaya A. S., Muntyan V. S., , Б.В.SimarovРумянцева М.Л. B. плазмиды V.inorhizobium , — природные рекомбинантные Roumiantseva [M. A.S.L.Muntyan , SimarovCrypticB.plasmids., RoumiantsevaM.L. of Sinorhizobium meliloti are natural recombinant replicons plasmids of Sinorhizobiummeliloti are natural recombinant replicons]

II International Scientific Conference " Plants and Microorganisms: Biotechnology of the Future "(PLAMIC2020), October 5-9, 2020, Saratov:

  • Vladimirova M. E.Мунтян, , Muntyan А.С.V. S.Симаров, , Saksaganskaya Филогения геномных островов у близкородственных видов рода A. S. ,. SimarovVladimirovaB. V., , V.S.RumiantsevaM. L. A.S.PhylogeneticSimarov B.V., Roumiantsevaanalysis of genomic islands in closely-related species belonging to the genus Sinorhizobium sp .to Sinorhizobium sp.]
  • MuntyanV..S.., MuntyanA..НN., SimarovB..V.., RumiantsevaM..L.. Phylogenetic analysis of vertically and horizontally inherited genes, responsible for salt tolerance in nitrogen-fixing alpha-proteobacteria [Muntyan V. S., Muntyan A. N., Simarov B. V., Roumiantseva M. L. Phylogenetic analysis of vertically and horizontally acquired genes responsible for salt tolerance in nitrogen-fixing alphaproteobacteria]
  • Karasev E..S., Andronov E..E., ChizevskayaE..P.., Provorov НN.АA. Comparative analysis of nucleotide polymorphism of chromosomal and symbiotic genes in symbionts козлятника of Eastern and medicinal goatgrass from популяции the North Caucasus population [Karasev E. P., Andronov E. E., Chizevskaya E. P., Provorov N. A. Comparative analysis of nucleotide polymorphism of chromosomal and symbiotic genes in symbionts of eastern and medical goat's rue from a population of the North Caucasus]

BGRS / SB-2020: 12th International Multiconference "Bioinformatics of Genome Regulation and Structure/Systems Biology", 06-10 July 2020, Novosibirsk, Russia / 12th InternationalMulticonference "Bioinformaticsof Genome RegulationandStructureгенома/SystemBiology", July 6-10 2020 , 2020, г. Novosibirsk:

  • Vladimirova M.E., Afonin A.M., Muntyan V.S., Simarov B.V., Roumiantseva M.L. Evaluation of Sinorhizobium meliloti genomic islands inserted into the tRNA – Thr
  • Muntyan V.S., Muntyan A.N., Antonova E.V., Kozlova A.P., Dzyubenko E.A., Roumiantseva M.L., Afonin A.M., Kabilov M.R. Comparative genomic analysis of moderate bacteriophages of alfalfa root nodule bacteria
  • Kozlova A.P., Muntyan V.S., Afonin A.M., Antonova E.V., Muntyan A.N., Kabilov M.R., Dzyubenko E.A., Roumiantseva M.L. Comparative genomic analysis of moderate bacteriophages of alfalfa root nodule bacteria
  • Saksaganskaia A.S., Muntyan V.S., Afonin A.M., Roumiantseva M.L. Cryptic plasmids of alfalfa root nodule bacteria – structural and functional diversity

VI All-Russian Youth Scientific Forum "OPENSCIENCE 2019", November 13-15, 2019, Gatchina:

  • Kozlova A. P., Cherkasova M. E., Muntyan V. S., Afonin A.M., Rumyantseva M. L. РизобиофагBacterial rhizobiophage Sinorhizobium melilotiisolated from the Central Asian alfalfa Diversity center

21st International Congress on Nitrogen Fixation, Oct. 10-15, 2019, Wuhan, China:

  • Roumiantseva M.L., Cherkasova M.E., Muntyan V.S. Phage related sequences abounded in sinorhizobia chromosomes and their evolutionary role
  • Muntyan V.S., Muntyan A.N., Simarov B.V., Roumiantseva M.L. Phylogenetic analysis of vertically and horizontally acquired genes responsible for salt tolerance of nitrogen-fixing alpha-proteobacteria

VIII scientific and practical conference with international participation "Genetics-the fundamental basis of innovations in medicine and breeding", September 26-29, 2019, Rostov-on-Don:

  • Cherkasova M. E., Saksaganskaya A. S., Muntyan V. S., Rumyantseva M. L. HSDgenes as search markers for economically valuable strains of Sinorhizobium meliloti
  • Saksaganskaya A. S., Cherkasova M. E., Muntyan V. S., Rumyantseva M. L. Molecular genetic approaches to the analysis of highly effective strains of Sinorhizobium meliloti

2nd Russian Microbiological Congress, September 23-27, 2019, Saransk:

  • Kozlova A. P., Cherkasova M. E., Muntyan V. S., Afonin A.M., Rumyantseva M. L. Sinorhizobium meliloti bacteriophagesisolated in the Lucerne diversity center

VII International Scientific and Practical Conference "Biotechnology: Science and Practice", September 16-20, 2019, Sevastopol:

  • Cherkasova M. E., Muntyan V. S., Saksaganskaya A. S., Simarov B. V., Rumyantseva M. L. Genomic islands of symbiotic nitrogen-fixing bacteria of the genus Sinorhizobium
  • Saksaganskaya A. S., Muntyan V. S., Laktionov Yu. V., Rumyantseva M. L., Simarov B. V. Nucleotide analysis of Nod factor synthesis genesof the strain Sinorhizobiummeliloti AK555, a highly effective alfalfa symbiont

44th FEBS Congress, 6-11 July 2019, Krakow, Poland:

  • Roumiantseva M., Cherkasova M., Muntyan V. Accessory elements of rhizobia chromosome: site-specific integration, structural and functional diversity
  • Muntyan V., Afonin A., Cherkasova M., Muntyan A., Saksaganskaya A., Roumiantseva M. The genome architecture of the strain Ensifer meliloti AK89, a highly effective symbiont of Medicago lupulina
  • Cherkasova M., Muntyan V., Saksaganskaia A., Simarov B., Roumiantseva M. S. medicae genomes screened for genomic islands
  • Saksaganskaia A., Kozlova A., Muntyan V., Cherkasova M., Roumiantseva M. Genome structure of highly effective strain Sinorhizobium meliloti AK555

VIII Congress of Young Scientists / Biotechnologies and Low-temperature Systems / Biotechnologies and Living Systems:

  • Prokhorova V. A., Kozlova A. P., Pastukhova N. D. Isolation of rhizobiophages and determination of their lytic activity

International Congress "VII Congress of the Vavilov Society of Geneticists and Breeders, dedicated to the 100th anniversary of the Department of Genetics of St. Petersburg State University, and associated symposia", June 18-22, 2019, St. Petersburg:

  • Rumyantseva M. L., Cherkasova M. E., Muntyan V. S. Bacterial genomic islands: functional significance and structural polymorphism
  • Cherkasova M. E., Muntyan V. S., Rumyantseva M. L., Simarov B. V. Genome of the model strain Sinorhizobium meliloti SHM1-105
  • Saksaganskaya A. S., Muntyan V. S., Laktionov Yu. V., Rumyantseva M. L., Simarov B. V. Genome of highly effective strain Sinorhizobium meliloti AK555
  • Chizhevskaya E. P., Onishchuk O. P., Kurchak O. N., Andronov E. E., Simarov B. V. Analysis of the melanin biosynthesis gene in natural strains of alfalfa nodule bacteria of various geographical origin
  • Kurchak O. N., Onishchuk O. P., Chizhevskaya E. P., Simarov B. V. Identification of genes involved in controlling the symbiotic efficiency of Sinorhizobium meliloti strains

III School-conference of Young scientists "Molecular-genetic and cellular aspects of plant-microbial interactions", June 17, 2019, St. Petersburg:

  • Cherkasova M. E., Muntyan V. S., Rumyantseva M. L., Simarov B. V. Genome of the model strain Sinorhizobium meliloti SHM1-105
  • Saksaganskaya A. S., Muntyan V. S., Laktionov Yu. V., Rumyantseva M. L., Simarov B. V. Genome of highly effective strain Sinorhizobium meliloti AK555

 

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